Subject
- Mechanical Engineering 4
- Bioinformatics 3
- Computer Science 2
- Interdisciplinary Research 2
- Life Sciences 2
Creator
- Zhongming Liu, 0000-0002-8773-4204 13
- Haiguang Wen 11
- Kun-Han Lu, 0000-0002-0355-8515 9
- Junxing Shi 8
- Yizhen Zhang 8
- Jiayue Cao 7
- Michael Markl 7
- Vitaliy Rayz 7
- Melissa Brindise 6
- Pavlos Vlachos, 0000-0002-8040-9257 6
Type
Date
subject: Biomedical Engineering
Total is 44 Results
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes
10.4231/6BAR-6W02
Apekshya Chhetri
,
Ho-Ching Yang
,
Joseph V Rispoli
,
Pratik Kashyap
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
08/03/2020
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including cortical and white matter parcellations, a T1-weighted template, and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Statistical Methods Trauma Workflow
In vitro Volumetric Particle Velocimetry, Computational Fluid Dynamics (CFD), and in vivo 4D Flow MRI Hemodynamic Data in Two Patient-Specific Cerebral Aneurysms
10.4231/M5F1-QC84
Benjamin Dickerhoff
,
David Saloner
,
Melissa Brindise
,
Michael Markl
,
Pavlos Vlachos
,
Sean Rothenberger
,
Susanne Schnell
,
Vitaliy Rayz
08/23/2019
Data from a pulsatile volumetric particle velocimetry study using two patient-specific cerebral aneurysm models, processed using Shake the Box (STB). Associated in vivo MRI and CFD datasets are also provided.
Biomedical Engineering Cerebral Aneurysm CFD Experimental Tests Fluid Mechanics Matlab MRI PIV Shake the Box
A Multi-state Model of the CaMKII Holoenzyme using MCell 3.3
10.4231/MBPK-D277
Matthew C Pharris
,
Tamara L Kinzer-Ursem
03/11/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calmodulin Computational Modeling Neuroscience Protein Signaling
A Multi-state Model of the CaMKII Holoenzyme using MCell 3.3
10.4231/MV0Z-8Z57
Matthew C Pharris
,
Tamara L Kinzer-Ursem
07/29/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calcium Calmodulin Computational Modeling Kinase Neuroscience Protein Signaling Rule-Based Modeling Synaptic Plasticity
Population-specific brain templates for adolescent collision-sport athletes in Purdue Neurotrauma Group longitudinal database
10.4231/XTZT-P683
Ho-Ching Yang
,
Joseph V Rispoli
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
09/12/2019
Unbiased population-specific brain templates for local adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including a T1-weighted template and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Spatial Warping Statistical Methods Trauma Workflow
In vitro Volumetric Particle Velocimetry, Computational Fluid Dynamics (CFD), and in vivo 4D Flow MRI Hemodynamic Data in Two Patient-Specific Cerebral Aneurysms - MRI
10.4231/C6DE-N845
Benjamin Dickerhoff
,
David Saloner
,
Melissa Brindise
,
Michael Markl
,
Pavlos Vlachos
,
Sean Rothenberger
,
Susanne Schnell
,
Vitaliy Rayz
11/01/2019
In vivo MRI dataset from a pulsatile volumetric particle velocimetry study using two patient-specific cerebral aneurysm models.
Biomedical Engineering Cerebral Aneurysm CFD Experimental Tests Fluid Mechanics Matlab MRI PIV Shake the Box
In vitro Volumetric Particle Velocimetry, Computational Fluid Dynamics (CFD), and in vivo 4D Flow MRI Hemodynamic Data in Two Patient-Specific Cerebral Aneurysms - CFD
10.4231/5RW6-4Z50
Benjamin Dickerhoff
,
David Saloner
,
Melissa Brindise
,
Michael Markl
,
Pavlos Vlachos
,
Sean Rothenberger
,
Susanne Schnell
,
Vitaliy Rayz
11/01/2019
In silico CFD dataset from a pulsatile volumetric particle velocimetry study using two patient-specific cerebral aneurysm models.
Biomedical Engineering Cerebral Aneurysm CFD Experimental Tests Fluid Mechanics Matlab MRI PIV Shake the Box
In vitro Volumetric Particle Velocimetry, Computational Fluid Dynamics (CFD), and in vivo 4D Flow MRI Hemodynamic Data in Two Patient-Specific Cerebral Aneurysms - STB
10.4231/FNF9-E631
Benjamin Dickerhoff
,
David Saloner
,
Melissa Brindise
,
Michael Markl
,
Pavlos Vlachos
,
Sean Rothenberger
,
Susanne Schnell
,
Vitaliy Rayz
11/01/2019
In vitro STB dataset from a pulsatile volumetric particle velocimetry study using two patient-specific cerebral aneurysm models.
Biomedical Engineering Cerebral Aneurysm CFD Experimental Tests Fluid Mechanics Matlab MRI PIV Shake the Box
MicroCT based FE model of bone core with tissue heterogeneity and anisotropy
10.4231/R7CC0XX4
Joseph Wallace
,
Matthew R Allen
,
Max A Hammond
,
Thomas Siegmund
06/26/2018
This publication contains a finite element model for the analysis of bone core under consideration of bone tissue heterogeneity and tissue anisotropy.
Biomedical Engineering Bone Finite Element Analysis Mechanical Engineering
Competitive Tuning of Ca2+/Calmodulin-Activated Proteins Provides a Compensatory Mechanism for AMPA Receptor Phosphorylation in Synaptic Plasticity
10.4231/R7VX0DS0
Matthew C Pharris
,
Tamara L. Kinzer-Ursem
07/30/2018
Code for the basic 4-state competitive binding model that builds on previous work by incorporating an additional competitor for calmodulin along with a number of downstream proteins. Also include is sample code for global sensitivity analysis...
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