Datasets

subject: Bioinformatics

Total is 14 Results
Signal Processing Toolbox for Simultaneously Acquired fMRI and EEG

10.4231/R7DB7ZSC

Rodrigo Castellanos , Zhongming Liu ORCID logo

06/07/2016

This Matlab toolbox includes signal processing functions to remove gradient and pulse artifacts in EEG data recorded simultaneously with fMRI. It is distributed as a GUI plugin for EEGLAB.

Bioinformatics Biomedical Engineering Electrical and Computer Engineering fMRI-EEG independent component analysis Signal Processing Singular value decomposition

Signal Processing Toolbox for Simultaneously Acquired fMRI and EEG

10.4231/R7QF8QT4

Rodrigo Castellanos , Zhongming Liu ORCID logo

07/27/2015

This Matlab toolbox includes signal processing functions to remove gradient and pulse artifacts in EEG data recorded simultaneously with fMRI. It is distributed as a GUI plugin for EEGLAB.

Bioinformatics Biomedical Engineering Electrical and Computer Engineering fMRI-EEG independent component analysis Signal Processing Singular value decomposition

Separating Fractal and Oscillatory Components in the Power Spectrum of Neurophysiological Signal

10.4231/R7WQ01R7

Haiguang Wen , Zhongming Liu ORCID logo

09/30/2015

Matlab toolbox for separating the fractal (scale-free) component and oscillatory component in the power spectrum from the mixed time series

Bioinformatics Biomedical Engineering fractal scale-free

Position of MLL1 morphemes in human genomic DNA

10.4231/R7H41PBT

Daidong Wang , Elise Novorolsky , Minou Bina ORCID logo , Noorfatin J. Zulkefl , Phillip J. Wyss

03/04/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013).

Binding Sites Bioinformatics Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

Evaluation of Function Predictions for Moonlighting Proteins

10.4231/D3T727G0X

Catherine Rayon , Daisuke Kihara ORCID logo , Ishita K. Khan , Meghana Chitale

02/14/2013

Supplemental datasets used for evaluation of function predictions for moonlighting proteins.

Biochemistry Bioinformatics Molecular Biosciences proteomics

Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP

10.4231/D3Z02Z836

Daisuke Kihara ORCID logo , Meghana Chitale , Troy Hawkins

02/14/2013

Supplementary Material for the Paper: Functional similarity network with high confidence protein function prediction by PFP. BMC Bioinformatics. 2010 May 19;11:265. doi: 10.1186/1471-2105-11-265.

Biochemistry Bioinformatics Computational Biology / Methods Genetic Molecular Biosciences Proteins / Metabolism

Threading Without Optimizing Weighting Factor for the Scoring Function Proteins

10.4231/D3PK0719W

Daisuke Kihara ORCID logo , David Yifeng

02/14/2013

Supplementary Material for the Paper: Threading Without Optimizing Weighting Factor for the Scoring Function Proteins, in revision (2008). Proteins. 2008 Nov 15;73(3):581-96. doi: 10.1002/prot.22082.

Algorithms Biochemistry Bioinformatics databases Molecular Biosciences Protein Proteins / chemistry

Statistical Potential based Amino Acid Similarity Matrices for Aligning Distantly Related Protein Sequences

10.4231/D3DR2P83H

Daisuke Kihara ORCID logo , H. Huang , Y.H. Tan

03/08/2013

Supplementary materials for the paper: Statistical Potential based Amino Acid Similarity Matrices for Aligning Distantly Related Protein Sequences. Proteins: Structure, Function and Bioinformatics 64: 587-600. (2006)

Amino Acids/chemistry Biochemistry Bioinformatics Molecular Biosciences Protein Folding

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