Total is 1319 Results
Soil Explorer


Darrell Schulze, Nicole Kong, Shirley Li


Soil Explorer is an interactive mapping tool built on publicly available soil data from a variety of sources. Viewers can zoom in on a number of states and global regions, and explore data on soil moisture, temperature, drainage and many other facets. The...

Soil Science Digital Soil Mapping Geographic Information Systems (GIS) Maps

EPublication Title


Erich Huebner




Phosphorus and Potassium Influence on Alfalfa Nutrition


Jeffrey J. Volenec


This is a master file of merged excel files with data from several studies on the influence of phosphorus and potassium nutrition on alfalfa. It includes numeric data such as yield, plant mass, plant counts, and tissue concentration of various nutrients. C...

Agronomy Crop Science Forage legumes Nutritive value Soil Fertility Soil Science Winter hardiness Yield components

Graph of Flickr Photo-Sharing Social Network Crawled in May 2006


David F Gleich


Flickr is a popular online-community for sharing photos, with millions of users. This graph is representative of its social network, in which the node set V represents users, and the edge set E is such that (u, v) is in E if and only if a user u has added...

Communication Computer Science

Controlling the cost and increasing the utility of network measurement infrastructures


Ethan L Blanton


Network measurement is an important tool in network research and operations, and is increasingly utilized in end-user applications. However, active measurements compete with other applications for limited network resources. These measurements are typically...

Computer Science Inference Internet

Evaluation of Function Predictions for Moonlighting Proteins


Catherine Rayon, Daisuke Kihara, Ishita K. Khan, Meghana Chitale


The performances of PFP, ESG, and PSI-BLAST in predicting the functional diversity of moonlighting proteins were analyzed. PFP shows overall better performance in predicting diverse moonlighting functions as compared with PSI-BLAST and ESG. Recall by PSI-B...

Biochemistry Bioinformatics Molecular Biosciences proteomics

Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP


Daisuke Kihara, Meghana Chitale, Troy Hawkins


BACKGROUND: A new paradigm of biological investigation takes advantage of technologies that produce large high throughput datasets, including genome sequences, interactions of proteins, and gene expression. The ability of biologists to analyze and interpre...

Biochemistry Bioinformatics Computational Biology / Methods Genetic Molecular Biosciences Proteins / Metabolism

Threading Without Optimizing Weighting Factor for the Scoring Function Proteins


Daisuke Kihara, David Yifeng


Optimizing weighting factors for a linear combination of terms in a scoring function is a crucial step for success in developing a threading algorithm. Usually weighting factors are optimized to yield the highest success rate on a training dataset, and the...

Algorithms Biochemistry Bioinformatics databases Molecular Biosciences Protein Proteins / chemistry

Statistical Potential based Amino Acid Similarity Matrices for Aligning Distantly Related Protein Sequences


Daisuke Kihara, H. Huang, Y.H. Tan


Aligning distantly related protein sequences is a long-standing problem in bioinformatics, and a key for successful protein structure prediction. Its importance is increasing recently in the context of structural genomics projects because more and more exp...

Amino Acids/chemistry Biochemistry Bioinformatics Molecular Biosciences Protein Folding

Comparative genomics of small RNAs in bacterial genomes


Daisuke Kihara, Stan Luban


In recent years, various families of small non-coding RNAs (sRNAs) have been discovered by experimental and computational approaches, both in bacterial and eukaryotic genomes. Although most of them await elucidation of their function, it has been reported...

Bacterial Bacterial/Genetics Biochemistry Bioinformatics Deinococcus/Genetics Escherichiacoli/Metabolism Molecular Biosciences Multigene Family RNA

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