10.4231/RTXE-0Q70
Apekshya Chhetri , Ho-Ching Yang , Joseph V Rispoli , Pratik Kashyap , Thomas M Talavage , Wenbin Zhu , Yukai Zou
10/28/2020
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including cortical and white matter parcellations, T1-weighted templates, and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Statistical Methods Trauma Workflow
10.4231/R7PG1PQR
Jingqun Ma , Pete E Pascuzzi , Vikki Marie Weake
02/20/2017
Supporting and raw data for Figures 1 - 5 and Figure S1 from: Ma et al. (2016) Transcriptome Profiling Identifies Multiplexin as a target of SAGA Deubiquitinase Activity in Glia.... G3 (Bethesda). PMID: 27261002.
axon guidance Biochemistry Drosophila glia Neuroscience nonstop RNA_seq SAGA sgf11 Transcriptome
10.4231/STQE-9A91
12/16/2021
In this study we demonstrate that torus longitudinalis feedback projections to tectum drive binocular integration and spatial summation in a defined tectal circuit. These findings reveal a novel role for the zebrafish torus longitudinalis.
biological sciences fluorescence microscopy Matlab Neuroscience research Vision zebrafish
10.4231/0BQQ-DV64
Elisabeth C DeMarco , Estuardo Robles , George R Stoner
08/15/2022
We have developed a genetic labeling system in zebrafish to enable high resolution in vivo imaging of dendritic spine dynamics during larval development.
biological sciences fluorescence microscopy Neuroscience Research Data Depot
10.4231/6BAR-6W02
Apekshya Chhetri , Ho-Ching Yang , Joseph V Rispoli , Pratik Kashyap , Thomas M Talavage , Wenbin Zhu , Yukai Zou
08/03/2020
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including cortical and white matter parcellations, a T1-weighted template, and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Statistical Methods Trauma Workflow
10.4231/MBPK-D277
Matthew C Pharris , Tamara L Kinzer-Ursem
03/11/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calmodulin Computational Modeling Neuroscience Protein Signaling
10.4231/MV0Z-8Z57
Matthew C Pharris , Tamara L Kinzer-Ursem
07/29/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calcium Calmodulin Computational Modeling Kinase Neuroscience Protein Signaling Rule-Based Modeling Synaptic Plasticity
10.4231/XTZT-P683
Ho-Ching Yang , Joseph V Rispoli , Thomas M Talavage , Wenbin Zhu , Yukai Zou
09/12/2019
Unbiased population-specific brain templates for local adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including a T1-weighted template and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Spatial Warping Statistical Methods Trauma Workflow
10.4231/R7ST7N11
Matthew C Pharris , Tamara L. Kinzer-Ursem
02/16/2018
Code for the basic 4-state competitive binding model that builds on previous work by incorporating an additional competitor for calmodulin along with a number of downstream proteins. Also include is sample code for global sensitivity analysis...
10.4231/R7N58JJ3
Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu
11/17/2017
This document includes the main source code (Matlab or Python) related to our study.
Biomedical Engineering deep learning FMR1 LIBI Matlab natural vision neural decoding Neural encoding Neuroscience Python Code Source Code
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