Subject
Creator
- Minou Bina, 0000-0001-6833-8698 16
- Phillip J. Wyss 9
- Phillip Wyss 4
- Xiaohui Carol Song 4
- Xiaohui Song 4
- Daidong Wang 2
- Xiaohui C. Song 2
- Elise Novorolsky 1
- Gilbert Kayanja 1
- Gregory E. Crawford 1
Type
- Dataset 17
Date
Total is 17 Results
Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics
10.4231/D3DZ03214
Gregory E. Crawford
,
Minou Bina
,
Phillip J. Wyss
,
Sang P. Park
,
Sheryl A. Lazarus
,
Syed A. Shah
,
Wenhui Ren
,
Wojciech Szpankowski
,
Xiaohui C. Song
12/17/2013
Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22
Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors
Positions of ZFBS and ZFBS-Morph overlaps in the build mm9 of the mouse genome
10.4231/R7C82782
Minou Bina
,
Phillip Wyss
,
Xiaohui Song
04/24/2017
Supplementary materials for the publication entitled “Imprinted Control Regions Include Composite DNA Elements consisting of the ZFP57 Binding Site overlapping MLL1 Morphemes” Bina M. Genomics, in press
Chemistry Codes in DNA CpG-rich motifs DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL binding sites MLL1 morphemes ZFP57
The positions of ZFBS and ZFBS-Morph overlaps in the build canFam2 of the dog genome
10.4231/8VWJ-JP51
Minou Bina
,
Phillip J. Wyss
,
Xiaohui Carol Song
09/28/2020
Locating regulatory DNA elements in the dog genome.
Canines Chemistry Codes in dog DNA CpG-rich motifs DMRs Dog genomics Gene Regulation Genomic imprinting Germline DMRs ICRs KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57
Density of ZFBS-Morph overlaps in the build canFam2 of the dog genome
10.4231/P6C1-5419
Minou Bina
,
Phillip Wyss
,
Xiaohui Song
06/16/2020
This publication provides a file (in wig.gz format) for examining the density of ZFBS-Morph overlaps at the UCSC genome browser.
Chemistry Codes in DNA DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57
Regulation of Phaeodactylum plastid gene transcription
10.4231/ME5R-C919
Gilbert Kayanja
,
Iskander Ibrahim
,
Sujith Puthiyaveetil
05/19/2021
This dataset contains raw data used for plotting the figures associated with the following publication https://link.springer.com/article/10.1007/s11120-020-00811-1
Biochemistry Gene Regulation light harvesting photosynthesis
The positions of ZFBS and ZFBS-Morph overlaps in the build bosTau8 of the Bos taurus genome
10.4231/K1SE-T951
Minou Bina
,
Phillip Wyss
,
Xiaohui Song
12/20/2019
This project provides data for locating the positions of the ZFBS and ZFBS-morph overlaps in the build bosTau8 of the cow genome.
Chemistry Codes in DNA CpG-rich motifs DMRs Gene Regulation Genomic imprinting Germline DMRs ICR Imprinting Control Regions KMT2A MLL MLL1 MLL1 Binding Sites MLL1 morphemes ZFP57
Density of ZFBS-Morph overlaps in the build bosTau8 of the Bos taurus genome
10.4231/HWBM-2M96
Minou Bina
,
Phillip Wyss
,
Xiaohui Song
01/02/2020
This publication provides a file (in wig.gz format) for displaying the density of ZFBS-Morph overlaps in the build bosTau8 of the cow genome.
Chemistry Codes in DNA DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57
Position of MLL1 morphemes in human genomic DNA
10.4231/R7H41PBT
Daidong Wang
,
Elise Novorolsky
,
Minou Bina
,
Noorfatin J. Zulkefl
,
Phillip J. Wyss
03/04/2014
Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013).
Binding Sites Bioinformatics Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements
Localization of MLL1 morphemes in mouse mm9 genomic DNA
10.4231/R7KW5CXF
Daidong Wang
,
Minou Bina
,
Phillip J. Wyss
,
Xiaohui C. Song
04/01/2014
Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013)
Binding Sites Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements
Density of ZFBS-Morph overlaps in the build hg19 of the human genome
10.4231/PR3C-J556
Minou Bina
,
Phillip J. Wyss
,
Xiaohui Carol Song
05/30/2019
Supplementary material for the publication entitled “Discovering candidate imprinted genes and Imprinting Control Regions in the human genome” Bina M. bioRxiv (2019), doi: 10.1101/678151.
Chemistry Codes in Human DNA Gene Regulation Genomic imprinting Genomics Germline DMRs Human Genome ICRs MLL ZFP57
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Results 1 - 10 of 17