PURR Registry

Positions of known ICRs/gDMRs with respect to peaks in plots of ZFBS-morph-overlap density in the mouse genome

10.4231/V87T-4X79

06/04/2020

Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).

Binding Sites Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes MLL1 morphemes Mouse genome ZFP57

The positions of ZFBS and ZFBS-Morph overlaps in the build canFam2 of the dog genome

10.4231/8VWJ-JP51

Minou Bina , Phillip J. Wyss , Xiaohui Carol Song

09/28/2020

Locating regulatory DNA elements in the dog genome.

Canines Chemistry Codes in dog DNA CpG-rich motifs DMRs Dog genomics Gene Regulation Genomic imprinting Germline DMRs ICRs KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57

Density of ZFBS-Morph overlaps in the build canFam2 of the dog genome

10.4231/P6C1-5419

Minou Bina , Phillip Wyss , Xiaohui Song

06/16/2020

This publication provides a file (in wig.gz format) for examining the density of ZFBS-Morph overlaps at the UCSC genome browser.

Chemistry Codes in DNA DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57

Dataset for Nitrate radical oxidation of γ-terpinene: hydroxy nitrate, total organic nitrate, and secondary organic aerosol yields

10.4231/R7CZ35BD

Jonathan Slade

07/15/2017

Data repository for the publication entitled "Nitrate radical oxidation of γ-terpinene: hydroxy nitrate, total organic nitrate, and secondary organic aerosol yields" by Slade et al., [2017] published in the journal Atmospheric Chemistry...

Chemistry Earth and Atmospheric Sciences Monoterpenes Nitrate Radical Organic Nitrates Secondary Organic Aerosol

Positions of predicted CTCF binding sites and unique A and B-repeats in the build hg19 of the Human Genome

10.4231/R74B2ZHD

Minou Bina

01/25/2018

Supplementary materials for a publication entitled “Assessment of the CTCF Binding Sites and Repeat-Positions Upstream the Human H19 Gene“ Bina, M. January 2018, bioRxiv doi: 10.1101/250407

Binding Sites Chemistry Chromatin Boundaries Cohesin CTCF Gene Regulation Genomic imprinting Genomics H19 Human Genome IGF2 RAD21 SMC3

Groundwater chemistry within Arequipa, Peru in the Characato, Chiguata, and Lagunas Salinas study areas

10.4231/PJRM-Q992

Elizabeth Olson , Lisa R. Welp , Marty D. Frisbee , Odiney Alvarez Campos

01/14/2022

We identified recharge zones and groundwater flowpaths supporting springs near Arequipa, Peru using general chemistry and isotopic tracers (δ18O, δ2H, and 3H) in springs, surface waters, and precipitation sampled from March 2019 through February...

Andes Arequipa Arequipa Nexus Institute Chemistry EAPS Groundwater Peru recharge salar stable isotopes

Figure X: Insolubility of AarCH6-C357Y

10.4231/D31834278

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Figures from Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023

10.4231/D3WH2DF2W

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Position of MLL1 morphemes in human genomic DNA

10.4231/R7H41PBT

Daidong Wang , Elise Novorolsky , Minou Bina , Noorfatin J. Zulkefl , Phillip J. Wyss

03/04/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013).

Binding Sites Bioinformatics Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

Localization of MLL1 morphemes in mouse mm9 genomic DNA

10.4231/R7KW5CXF

Daidong Wang , Minou Bina , Phillip J. Wyss , Xiaohui C. Song

04/01/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013)

Binding Sites Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

Datasets

Subject

Creator

Type

Date

Total is 33 Results