Datasets

Subject

Creator

Type

Dataset 46

Date

2021 3
2020 13
2019 1
2018 4
2017 14
2015 1
2013 10

subject: Biochemistry type: dataset

Total is 46 Results

Limitations and Potentials of Current Motif Discovery Algorithms

10.4231/D33F4KN2K

Bin Li , Daisuke Kihara , Jianjun Hu

03/08/2013

Supplementary material for the papers: Limitations and Potentials of Current Motif Discovery Algorithms, Nucleic Acids Res. 2005; 33(15): 4899–4913

Algorithms Base Sequence Binding Sites Biochemistry Bioinformatics Computational Biology / Methods DNA/Chemistry DNA/methods Escherichia coli/Genetics Factors/Metabolism Markov Chains Markov Chains Regulatory Sequences Molecular Biosciences Regulon Sequence Alignment Sequence Analysis

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Puccinia striiformis

10.4231/JG06-Q133

Blen Kedir , Christopher Wang , Jessie Lee , Kavya M Shah , Mark C Hall , Sergio Diaz , Tomi Siyanbade

08/26/2020

In SSP Biochemistry, high school participants conduct group research projects to characterize the Cdc14 phosphatase homolog from a phytopathogenic fungus and explore its potential as a novel antifungal target to protect crops from disease

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Puccinia striiformis Summer Science Program

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Rhizoctonia solani

10.4231/DCN9-HC05

Alex Liu , Ayush Pandit , Caroline Katz , Joyce An , Kathryn A Tso , Mark C Hall , Tudor O Sirbu

08/26/2020

In SSP Biochemistry, high school participants conduct group research projects to characterize the Cdc14 phosphatase homolog from a phytopathogenic fungus and explore its potential as a novel antifungal target to protect crops from disease

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Rhizoctonia solani Summer Science Program

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Thielaviopsis punctulata

10.4231/Q9GK-PH62

Alex J Dong , Benjamin Thomas , Ching Ying Li , Christopher Ye , Claire Kim , Eric J Yuan , James Yin , Mark C Hall , Monica Chang , Raphael Li , Reed Lessing , Sivasai R Manyapu , Veronica A Gutierrez

08/26/2020

In SSP Biochemistry, high school participants conduct group research projects to characterize the Cdc14 phosphatase homolog from a phytopathogenic fungus and explore its potential as a novel antifungal target to protect crops from disease

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Summer Science Program Thielaviopsis punctulata

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Ustilago maydis

10.4231/RZTW-V362

Alex Wang , Anusha Sriram , Ketan Jog , Leyna Duong , Mark C Hall , Michael Tian , Sabra Dunakey

08/25/2020

In SSP Biochemistry, high school participants conduct group research projects to characterize the Cdc14 phosphatase homolog from a phytopathogenic fungus and explore its potential as a novel antifungal target to protect crops from disease

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Summer Science Program Ustilago maydis

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Verticillium longisporum

10.4231/Q5QS-ES90

Angela Gao , Brandon L Gong , Evan A Yandell , Hyunjun Ahn , Lea E Twicken , Mark C Hall , Phuong Linh Vu

08/27/2020

In SSP Biochemistry, high school participants conduct group research projects to characterize the Cdc14 phosphatase homolog from a phytopathogenic fungus and explore its potential as a novel antifungal target to protect crops from disease

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Summer Science Program Verticillium longisporum

Characterizing a gene expression toolkit for eye- and photoreceptor-specific expression in Drosophila - Supporting data for Escobedo et al. (2021)

10.4231/6AF9-3085

Spencer Escobedo , Vikki Marie Weake

02/23/2021

Supporting and raw data for Escobedo et al. (2021) including microscopy images.

Biochemistry Drosophila Eye Gal4 Photoreceptor

Regulation of Phaeodactylum plastid gene transcription

10.4231/ME5R-C919

Gilbert Kayanja , Iskander Ibrahim , Sujith Puthiyaveetil

05/19/2021

This dataset contains raw data used for plotting the figures associated with the following publication https://link.springer.com/article/10.1007/s11120-020-00811-1

Biochemistry Gene Regulation light harvesting photosynthesis

Metabolic Source Isotopic Pair Labeling and Genome-Wide Association Are Complementary Tools for the Identification of Metabolite-Gene Associations in Plants

10.4231/1702-6M85

Brian Dilkes , Clint C S Chapple , Cole Wunderlich , Jeffrey Simpson , Xu Li

03/08/2021

Development of PODIUM: A tool to identify and extract from untargeted LC-MS data MS features that incorporated 13C-fed isotopic labels.

Biochemistry liquid chromatography–mass spectrometry (LC–MS) metabolomics Plant Metabolism stable isotope labeling untargeted metabolomics analyses

Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics

10.4231/D3DZ03214

Gregory E. Crawford , Minou Bina , Phillip J. Wyss , Sang P. Park , Sheryl A. Lazarus , Syed A. Shah , Wenhui Ren , Wojciech Szpankowski , Xiaohui C. Song

12/17/2013

Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22

Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors

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