10.4231/0FAA-GK65
Jennifer Wisecaver, 0000-0001-6843-5906, Patrick Edger
02/18/2019
Global coexpression analysis of blueberry genome identify genes co-regulated during fruit development and associated with phytonutrient biosynthesis
Biochemistry Blueberry Gene Expression Plant Metabolism RStudio
10.4231/R7TT4P5D
Brenda F Owens, Brian Dilkes, 0000-0003-2799-954X
05/31/2018
The 282 member maize association panel was grown under irrigated and non-irrigated conditions and kernels were phenotyped for ionome and isotope traits.
10.4231/R77W69FM
Hana Hall, Jingqun Ma, Sudhanshu Shekhar, Vikki Weake, 0000-0002-5933-9952, Walter Leon-Salas
06/20/2018
Supporting and raw data for Hall and Ma et al. (2018) Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors. BMC Neuroscience.
Biochemistry Blue Light Differential gene expresion Drosophila Eye Gene Expression Profiling Retinal Degeneration RNA_seq Transcriptome
10.4231/R7ZG6QGD
Hana Hall, Henry Chang, Rachel Stegeman, 0000-0002-7563-8506, Spencer Escobedo, Vikki Weake, 0000-0002-5933-9952
06/07/2018
Supporting data and protocols for for Stegeman et al. (2018). Proper splicing contributes to visual function in the aging Drosophila eye. Aging Cell.
Aging Biochemistry Drosophila Eye Gene Expression Profiling Splicing Transcriptome Vision
10.4231/R72V2DD0
Aktan Alpsoy, Benjamin D. Anderson, Eliana F. Torres-Zelada, Emily C. Dykhuizen, Laurence Florens, Michael P. Washburn, Robert E. Stephenson, Selene K. Swanson, Vikki Weake, 0000-0002-5933-9952
12/11/2018
Supporting data and protocols for for Torres-Zelada et al. (2018). The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability. Journal of Cell Science.
Biochemistry Chiffon Dbf4 Drosophila Gcn5 Gene Expression Histone Acetylation Replication
10.4231/D3T727G0X
Catherine Rayon, Daisuke Kihara, 0000-0003-4091-6614, Ishita K. Khan, Meghana Chitale
02/14/2013
Supplemental datasets used for evaluation of function predictions for moonlighting proteins.
Biochemistry Bioinformatics Molecular Biosciences proteomics
10.4231/D3Z02Z836
Daisuke Kihara, 0000-0003-4091-6614, Meghana Chitale, Troy Hawkins
02/14/2013
Supplementary Material for the Paper: Functional similarity network with high confidence protein function prediction by PFP. BMC Bioinformatics. 2010 May 19;11:265. doi: 10.1186/1471-2105-11-265.
Biochemistry Bioinformatics Computational Biology / Methods Genetic Molecular Biosciences Proteins / Metabolism
10.4231/D3PK0719W
Daisuke Kihara, 0000-0003-4091-6614, David Yifeng
02/14/2013
Supplementary Material for the Paper: Threading Without Optimizing Weighting Factor for the Scoring Function Proteins, in revision (2008). Proteins. 2008 Nov 15;73(3):581-96. doi: 10.1002/prot.22082.
Algorithms Biochemistry Bioinformatics databases Molecular Biosciences Protein Proteins / chemistry
10.4231/D3DR2P83H
Daisuke Kihara, 0000-0003-4091-6614, H. Huang, Y.H. Tan
03/08/2013
Supplementary materials for the paper: Statistical Potential based Amino Acid Similarity Matrices for Aligning Distantly Related Protein Sequences. Proteins: Structure, Function and Bioinformatics 64: 587-600. (2006)
Amino Acids/chemistry Biochemistry Bioinformatics Molecular Biosciences Protein Folding
10.4231/D37659F6Q
Daisuke Kihara, 0000-0003-4091-6614, Stan Luban
03/08/2013
Supplemental Material for the paper: Comparative genomics of small RNAs in bacterial genomes. OMICS. 2007 Spring;11(1):58-73.
Bacterial Bacterial/Genetics Biochemistry Bioinformatics Deinococcus/Genetics Escherichiacoli/Metabolism Molecular Biosciences Multigene Family RNA
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