PURR Registry

Regulation of Phaeodactylum plastid gene transcription

10.4231/ME5R-C919

Gilbert Kayanja , Iskander Ibrahim , Sujith Puthiyaveetil

05/19/2021

This dataset contains raw data used for plotting the figures associated with the following publication https://link.springer.com/article/10.1007/s11120-020-00811-1

Biochemistry Gene Regulation light harvesting photosynthesis

The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability - Supporting data for Torres-Zelada et al. (2018)

10.4231/R72V2DD0

Aktan Alpsoy , Benjamin D. Anderson , Eliana F. Torres-Zelada , Emily C. Dykhuizen , Laurence Florens , Michael P. Washburn , Robert E. Stephenson , Selene K. Swanson , Vikki Weake

12/11/2018

Supporting data and protocols for for Torres-Zelada et al. (2018). The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability. Journal of Cell Science.

Biochemistry Chiffon Dbf4 Drosophila Gcn5 Gene Expression Histone Acetylation Replication

Global coexpression analysis of genes in haplotype-phased genome of tetraploid blueberry.

10.4231/0FAA-GK65

Jennifer Wisecaver , Patrick Edger

02/18/2019

Global coexpression analysis of blueberry genome identify genes co-regulated during fruit development and associated with phytonutrient biosynthesis

Biochemistry Blueberry Gene Expression Plant Metabolism RStudio

Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence - Supporting data for Hall et al. (2017)

10.4231/R7736P29

Christopher Vincent , Daphne A. Cooper , Hana Hall , Jeremiah Rounds , Kaelan J. Brennan , Patrick Medina , Pedro Miura , Rebecca Doerge , Spencer E. Escobedo , Vikki Weake

11/17/2017

Supporting and raw data for Figures 1 - 5 and supplemental figures from Hall et al. (2017) Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence. BMC Genomics.

Aging Biochemistry Drosophila Eye Gene Expression Profiling Photoreceptors RNA_seq Transcription Transcriptome

Maize 282 Kernel Ion and Isotope BLUPs

10.4231/R7TT4P5D

Brenda F Owens , Brian Dilkes

05/31/2018

The 282 member maize association panel was grown under irrigated and non-irrigated conditions and kernels were phenotyped for ionome and isotope traits.

Biochemistry Carbon Drought Ionome Isotope Maize

Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors - Supporting data for Hall and Ma et al. (2018)

10.4231/R77W69FM

Hana Hall , Jingqun Ma , Sudhanshu Shekhar , Vikki Weake , Walter Leon-Salas

06/20/2018

Supporting and raw data for Hall and Ma et al. (2018) Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors. BMC Neuroscience.

Biochemistry Blue Light Differential gene expresion Drosophila Eye Gene Expression Profiling Retinal Degeneration RNA_seq Transcriptome

Proper splicing contributes to visual function in the aging Drosophila eye - Supporting data for Stegeman et al. (2018)

10.4231/R7ZG6QGD

Hana Hall , Henry Chang , Rachel Stegeman , Spencer Escobedo , Vikki Weake

06/07/2018

Supporting data and protocols for for Stegeman et al. (2018). Proper splicing contributes to visual function in the aging Drosophila eye. Aging Cell.

Aging Biochemistry Drosophila Eye Gene Expression Profiling Splicing Transcriptome Vision

Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics

10.4231/D3DZ03214

Gregory E. Crawford , Minou Bina , Phillip J. Wyss , Sang P. Park , Sheryl A. Lazarus , Syed A. Shah , Wenhui Ren , Wojciech Szpankowski , Xiaohui C. Song

12/17/2013

Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22

Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors

Figure X: Insolubility of AarCH6-C357Y

10.4231/D31834278

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Figures from Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023

10.4231/D3WH2DF2W