PURR Registry

Position of MLL1 morphemes in human genomic DNA

10.4231/R7H41PBT

Daidong Wang , Elise Novorolsky , Minou Bina , Noorfatin J. Zulkefl , Phillip J. Wyss

03/04/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013).

Binding Sites Bioinformatics Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

Localization of MLL1 morphemes in mouse mm9 genomic DNA

10.4231/R7KW5CXF

Daidong Wang , Minou Bina , Phillip J. Wyss , Xiaohui C. Song

04/01/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013)

Binding Sites Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

An overview of peak positions –in plots of ZFBS-morph-overlap density– with respect to known ICRs/gDMRs in the mouse genome

10.4231/32C9-G644

Minou Bina

06/04/2020

Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).

Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes Mouse genome ZFP57

Positions of known ICRs/gDMRs with respect to peaks in plots of ZFBS-morph-overlap density in the mouse genome

10.4231/V87T-4X79

Minou Bina

06/04/2020

Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).

Binding Sites Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes MLL1 morphemes Mouse genome ZFP57

The positions of ZFBS and ZFBS-Morph overlaps in the build canFam2 of the dog genome

10.4231/8VWJ-JP51

Minou Bina , Phillip J. Wyss , Xiaohui Carol Song

09/28/2020

Locating regulatory DNA elements in the dog genome.

Canines Chemistry Codes in dog DNA CpG-rich motifs DMRs Dog genomics Gene Regulation Genomic imprinting Germline DMRs ICRs KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57

Density of ZFBS-Morph overlaps in the build canFam2 of the dog genome

10.4231/P6C1-5419

Minou Bina , Phillip Wyss , Xiaohui Song

06/16/2020

This publication provides a file (in wig.gz format) for examining the density of ZFBS-Morph overlaps at the UCSC genome browser.

Chemistry Codes in DNA DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL1 Binding Sites MLL1 morphemes ZFP57

Impact of dry intrusion events on the composition and mixing state of particles during the winter Aerosol and Cloud Experiment in the Eastern North Atlantic (ACE-ENA)

10.4231/6CT5-3R55

Alexander Laskin , Daniel Knopf , Daniel Veghte , Felipe Rivera-Adorno , Guangjie Zheng , Jay Mendoza Tomlin , Jian Wang , Johannes Weis , Kevin Jankowski , Mary Gilles , Matthew Fraund , Peiwen Wang , Ryan Moffet , Shira Raveh-Rubin , Swarup China , Yang Wang

12/07/2021

Analysis of individual atmospheric particles shows that aerosol transported from North America during meteorological dry intrusion episodes have a substantial impact on the mixing state and particle-type population over the mid-Atlantic.

Aerosols Atmospheric Chemistry Chemical Imaging Chemistry Mixing States

Chemical Composition and Morphological Analysis of Atmospheric Particles from an Intensive Bonfire Burning Festival

10.4231/TB6F-SJ55

Alexander Laskin , Ana Morales , Chunlin Li , Daniel Veghte , Felipe Rivera-Adorno , Jay Tomlin , Johannes Weis , Kevin Jankowski , Mary Gilles , Matthew Fraund , Naama Reicher , Quanfu He , Ryan Moffet , Swarup China , Yinon Rudich

06/10/2022

Chemical imaging of atmospheric particles during the 2018 Lag Ba'Omer festival provided quantitative description of individual particle composition and mixing states to characterize the temporal evolution of biomass burning particles.

Aerosol Mass Spectrometer Aerosols Biomass Burning Chemical Imaging Chemistry Mixing State Scanning Electron Microscopy Scanning Mobility Particle Sizer Scanning Transmission X-ray Microscopy

Atmospheric emission of nanoplastics from sewer pipes repair

10.4231/XR71-ZM27

Alexander Laskin , Ana Morales , Andrew Whelton , Brandon Boor , Brian O'Callahan , Brianna Peterson , Christopher West , Felipe Rivera-Adorno , Jay Tomlin , John Howarter , Patrick El-Khoury , Ryan Moffet , Seyedeh Sendesi , Steven Sharpe , Swarup China , Yoorae Noh

08/12/2022

Common technology of sewer pipe repairs emits airborne nanoplastic particles at significant scale that may impact the environment and air quality in urban areas.

airborne particles Chemistry EAPS environmental nanoplastics urban emissions

Structure-function relationships of cholesterol mobilization from the endo-lysosome compartment of NPC1-deficient human cells by β-CD polyrotaxanes

10.4231/NK5J-6T74

David H Thompson , Judith Storch

10/25/2022

2-Hydroxypropyl-β-cyclodextrin containing polyrotaxanes represent an attractive approach for treatment of a rare metabolic disorder Niemann-Pick Type C.

Chemistry Cholesterol Niemann-Pick β-CD polyrotaxanes

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Total is 33 Results