PURR Registry

Competitive Tuning of Ca2+/Calmodulin-Activated Proteins Provides a Compensatory Mechanism for AMPA Receptor Phosphorylation in Synaptic Plasticity

10.4231/R7ST7N11

Matthew C Pharris , Tamara L. Kinzer-Ursem

02/16/2018

Code for the basic 4-state competitive binding model that builds on previous work by incorporating an additional competitor for calmodulin along with a number of downstream proteins. Also include is sample code for global sensitivity analysis...

Biomedical Engineering Calmodulin Neuroscience

Mathematica Files: Competitive tuning: competition’s role in setting the frequency-dependence of Ca2+-dependent proteins

10.4231/R7154F7Q

Daniel Romano , Matthew C Pharris , Neal Patel , Tamara Kinzer-Ursem

09/08/2017

We study the competition among seven well-studied neuronal proteins for their common binding partner, calmodulin. We find that competition narrows and shifts the range over which proteins can be activated.

Biomedical Engineering Calcineurin Calmodulin Computational Biology Mathematica Signal Transduction

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 1

10.4231/R7X63K3M

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/15/2017

This is a video-fMRI dataset for subject 1 (out of three) acquired by the Laboratory of Integrated Brain Imaging (LIBI),

Biomedical Engineering deep learning fMRI LIBI natural vision neural decoding Neural encoding Neuroscience

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 2

10.4231/R7NS0S1F

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/18/2017

This is a video-fMRI dataset for subject 2 (out of three) acquired by the Laboratory of Integrated Brain Imaging (LIBI).

Biomedical Engineering deep learning fMRI LIBI natural vision neural decoding Neural encoding Neuroscience

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 3

10.4231/R7J101BV

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/15/2017

This is a video-fMRI dataset for subject 3 (out of three) acquired by the Laboratory of Integrated Brain Imaging (LIBI).

Biomedical Engineering deep learning fMRI LIBI movie stimuli natural vision neural decoding Neural encoding Neuroscience

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Stimuli

10.4231/R71Z42KK

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/15/2017

This is a video-fMRI dataset contains the videos with stimuli acquired by the Laboratory of Integrated Brain Imaging (LIBI).

Biomedical Engineering deep learning fMRI LIBI movie stimuli natural vision neural decoding Neural encoding Neuroscience

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests

10.4231/R7SF2TCW

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/15/2017

This is a video-fMRI dataset contains the videos with stimuli acquired by the Laboratory of Integrated Brain Imaging (LIBI).

Biomedical Engineering deep learning fMRI LIBI natural vision neural decoding Neural encoding Neuroscience

Source code for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision

10.4231/R7V98675

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

09/25/2017

This document includes the main source code (Matlab or Python) related to our study.

Biomedical Engineering deep learning FMR1 LIBI Matlab natural vision neural decoding Neural encoding Neuroscience Python Code Source Code

Repeated Free-Viewing of a Natural Movie Stimulus Using fMRI

10.4231/R71V5C4T

Haiguang Wen , Kun-Han Lu , Lauren Kelly Marussich , Shao-Chin Hung , Zhongming Liu

10/06/2017

Video-fMRI dataset acquired by the Laboratory of Integrated Brain Imaging (LIBI, https://engineering.purdue.edu/libi) at Purdue University.

Biomedical Engineering fMRI Intra-Subject Reproducibility LIBI movie stimuli natural vision Neuroscience

Source code for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision

10.4231/R7N58JJ3

Haiguang Wen , Jiayue Cao , Junxing Shi , Kun-Han Lu , Yizhen Zhang , Zhongming Liu

11/17/2017

This document includes the main source code (Matlab or Python) related to our study.

Biomedical Engineering deep learning FMR1 LIBI Matlab natural vision neural decoding Neural encoding Neuroscience Python Code Source Code

Datasets

Subject

Creator

Type

Date

Total is 44 Results

Competitive Tuning of Ca2+/Calmodulin-Activated Proteins Provides a Compensatory Mechanism for AMPA Receptor Phosphorylation in Synaptic Plasticity

Mathematica Files: Competitive tuning: competition’s role in setting the frequency-dependence of Ca2+-dependent proteins

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 1

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 2

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Subject 3

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests - Stimuli

Data for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision Tests

Source code for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision

Repeated Free-Viewing of a Natural Movie Stimulus Using fMRI

Source code for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision

Datasets

All fields DOI Author Subject Search

Subject

Creator

Type

Date

Total is 44 Results