PURR Registry

Maize 282 Kernel Ion and Isotope BLUPs

10.4231/R7TT4P5D

05/31/2018

The 282 member maize association panel was grown under irrigated and non-irrigated conditions and kernels were phenotyped for ionome and isotope traits.

Biochemistry Carbon Drought Ionome Isotope Maize

Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors - Supporting data for Hall and Ma et al. (2018)

10.4231/R77W69FM

Hana Hall , Jingqun Ma , Sudhanshu Shekhar , Vikki Weake , Walter Leon-Salas

06/20/2018

Supporting and raw data for Hall and Ma et al. (2018) Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors. BMC Neuroscience.

Biochemistry Blue Light Differential gene expresion Drosophila Eye Gene Expression Profiling Retinal Degeneration RNA_seq Transcriptome

Proper splicing contributes to visual function in the aging Drosophila eye - Supporting data for Stegeman et al. (2018)

10.4231/R7ZG6QGD

Hana Hall , Henry Chang , Rachel Stegeman , Spencer Escobedo , Vikki Weake

06/07/2018

Supporting data and protocols for for Stegeman et al. (2018). Proper splicing contributes to visual function in the aging Drosophila eye. Aging Cell.

Aging Biochemistry Drosophila Eye Gene Expression Profiling Splicing Transcriptome Vision

The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability - Supporting data for Torres-Zelada et al. (2018)

10.4231/R72V2DD0

Aktan Alpsoy , Benjamin D. Anderson , Eliana F. Torres-Zelada , Emily C. Dykhuizen , Laurence Florens , Michael P. Washburn , Robert E. Stephenson , Selene K. Swanson , Vikki Weake

12/11/2018

Supporting data and protocols for for Torres-Zelada et al. (2018). The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability. Journal of Cell Science.

Biochemistry Chiffon Dbf4 Drosophila Gcn5 Gene Expression Histone Acetylation Replication

Global coexpression analysis of genes in haplotype-phased genome of tetraploid blueberry.

10.4231/0FAA-GK65

Jennifer Wisecaver , Patrick Edger

02/18/2019

Global coexpression analysis of blueberry genome identify genes co-regulated during fruit development and associated with phytonutrient biosynthesis

Biochemistry Blueberry Gene Expression Plant Metabolism RStudio

Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration - Supporting data for Fig 6 from Chen et al. (2017)

10.4231/R7SB43X3

Donald Ready , Hana Hall , Jeffrey Simpson , Vikki Weake , Walter Leon-Salas , Xinping Chen

10/30/2017

Supporting confocal microscopy images and ROS assays for Fig 6 from Chen et al. (2017). "Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration"

Biochemistry Drosophila Lipid Peroxidation Phototoxicity Retinal Degeneration

Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration - Supporting data for supplemental Figures from Chen et al. (2017)

10.4231/R7NK3C6S

Donald Ready , Hana Hall , Jeffrey Simpson , Vikki Weake , Walter Leon-Salas , Xinping Chen

10/30/2017

Supporting data for supplemental Figures Fig. S1 - Fig. S6 from Chen et al. (2017). "Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration"

Biochemistry Drosophila Lipid Peroxidation Phototoxicity Retinal Degeneration

A programmable optical stimulator for the Drosophila eye - Supporting biological data for Chen et al. (2017).

10.4231/R75H7DFT

Donald F Ready , Vikki Weake , Walter Leon-Salas , Xinping Chen

10/27/2017

Confocal microscopy images for Chen et al. (2017). HardwareX. "A programmable optical stimulator for the Drosophila eye" 13-33.

Biochemistry Blue Light Drosophila Lipid Peroxidation Optical Stimulator Phototoxicity Retinal Degeneration

Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence - Supporting data for Hall et al. (2017)

10.4231/R7736P29

Christopher Vincent , Daphne A. Cooper , Hana Hall , Jeremiah Rounds , Kaelan J. Brennan , Patrick Medina , Pedro Miura , Rebecca Doerge , Spencer E. Escobedo , Vikki Weake

11/17/2017

Supporting and raw data for Figures 1 - 5 and supplemental figures from Hall et al. (2017) Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence. BMC Genomics.

Aging Biochemistry Drosophila Eye Gene Expression Profiling Photoreceptors RNA_seq Transcription Transcriptome

Occurrences of MLL1 morphemes in human cDNAs retrieved from GenBank

10.4231/R71834DW

Minou Bina , Phillip J. Wyss

04/24/2015

Supplementary material for the publication entitled “Impact of the MLL1 Morphemes on Codon Utilization and Preservation in CpG Islands.” Bina, M, Wyss P. Biopolymers in press.

Biochemistry Bioinformatics Chemistry Coding sequences Codon bias Codon selection Codon utilization CpG islands Exon Exons Genomics Human Genome MLL1 morphemes in CDSs MLL1 morphemes in exons Morphemes MLL1 Overlapping codes Regulatory codes in DNA Trithorax response elements

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Total is 46 Results