PURR Registry

The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability - Supporting data for Torres-Zelada et al. (2018)

10.4231/R72V2DD0

Aktan Alpsoy , Benjamin D. Anderson , Eliana F. Torres-Zelada , Emily C. Dykhuizen , Laurence Florens , Michael P. Washburn , Robert E. Stephenson , Selene K. Swanson , Vikki Weake

12/11/2018

Supporting data and protocols for for Torres-Zelada et al. (2018). The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability. Journal of Cell Science.

Biochemistry Chiffon Dbf4 Drosophila Gcn5 Gene Expression Histone Acetylation Replication

Global coexpression analysis of genes in haplotype-phased genome of tetraploid blueberry.

10.4231/0FAA-GK65

Jennifer Wisecaver , Patrick Edger

02/18/2019

Global coexpression analysis of blueberry genome identify genes co-regulated during fruit development and associated with phytonutrient biosynthesis

Biochemistry Blueberry Gene Expression Plant Metabolism RStudio

A programmable optical stimulator for the Drosophila eye - Supporting biological data for Chen et al. (2017).

10.4231/R75H7DFT

Donald F Ready , Vikki Weake , Walter Leon-Salas , Xinping Chen

10/27/2017

Confocal microscopy images for Chen et al. (2017). HardwareX. "A programmable optical stimulator for the Drosophila eye" 13-33.

Biochemistry Blue Light Drosophila Lipid Peroxidation Optical Stimulator Phototoxicity Retinal Degeneration

Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence - Supporting data for Hall et al. (2017)

10.4231/R7736P29

Christopher Vincent , Daphne A. Cooper , Hana Hall , Jeremiah Rounds , Kaelan J. Brennan , Patrick Medina , Pedro Miura , Rebecca Doerge , Spencer E. Escobedo , Vikki Weake

11/17/2017

Supporting and raw data for Figures 1 - 5 and supplemental figures from Hall et al. (2017) Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence. BMC Genomics.

Aging Biochemistry Drosophila Eye Gene Expression Profiling Photoreceptors RNA_seq Transcription Transcriptome

Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics

10.4231/D3DZ03214

Gregory E. Crawford , Minou Bina , Phillip J. Wyss , Sang P. Park , Sheryl A. Lazarus , Syed A. Shah , Wenhui Ren , Wojciech Szpankowski , Xiaohui C. Song

12/17/2013

Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22

Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors

Figure X: Insolubility of AarCH6-C357Y

10.4231/D31834278

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Figures from Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023

10.4231/D3WH2DF2W

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

The Spliceosomal Protein SF3B5 is a Novel Component of Drosophila SAGA that Functions in Gene Expression Independent of Splicing - Supporting data for Stegeman et al. (2016)

10.4231/R74Q7S5J

Rachel Stegeman , Vikki Weake

11/03/2017

Supporting and raw data for Figures 1 - 5 from Stegeman R. et al. (2016). The Spliceosomal Protein SF3B5 is a Novel Component of Drosophila SAGA that Functions in Gene Expression Independent of Splicing. Journal of Molecular Biology. PMID: 27185460.

Biochemistry Drosophila Gene Expression SAGA Splicing Transcription

Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration - Supporting data for Fig 4 from Chen et al. (2017)

10.4231/R7X34VNF

Donald Ready , Hana Hall , Jeffrey Simpson , Vikki Weake , Walter Leon-Salas , Xinping Chen

10/30/2017

Supporting confocal and electron microscopy images for Fig 4 from Chen et al. (2017). "Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration"

Biochemistry Drosophila Lipid Peroxidation Phototoxicity Retinal Degeneration

Cytochrome b5 protects photoreceptors from light stress-induced lipid peroxidation and retinal degeneration - Supporting data for Fig 1 from Chen et al. (2017)

10.4231/R7JS9NMW