Datasets

Subject
Creator
Type
Date

subject: Bioinformatics subject: Binding Sites type: dataset

Total is 3 Results
Characterization of Local Geometry of Protein Surfaces with the Visibility Criteria

10.4231/D3BZ61792

Bin Li , Daisuke Kihara ORCID logo , Manish Agrawal , Srinivasan Turuvekere

03/08/2013

Supplementary material for the paper: Characterization of Local Geometry of Protein Surfaces with the Visibility Criteria. Proteins. 2008 May 1;71(2):670-83.

Argininosuccinate Synthase Binding Sites Biochemistry Bioinformatics Computer Simulation Molecular Biosciences Protein Structure Sensitivity and Specificity Tertiary Tetrahydrofolate Dehydrogenase/chemistry

Limitations and Potentials of Current Motif Discovery Algorithms

10.4231/D33F4KN2K

Bin Li , Daisuke Kihara ORCID logo , Jianjun Hu

03/08/2013

Supplementary material for the papers: Limitations and Potentials of Current Motif Discovery Algorithms, Nucleic Acids Res. 2005; 33(15): 4899–4913

Algorithms Base Sequence Binding Sites Biochemistry Bioinformatics Computational Biology / Methods DNA/Chemistry DNA/methods Escherichia coli/Genetics Factors/Metabolism Markov Chains Markov Chains Regulatory Sequences Molecular Biosciences Regulon Sequence Alignment Sequence Analysis

Position of MLL1 morphemes in human genomic DNA

10.4231/R7H41PBT

Daidong Wang , Elise Novorolsky , Minou Bina ORCID logo , Noorfatin J. Zulkefl , Phillip J. Wyss

03/04/2014

Supplementary materials for the publication entitled “Discovery of MLL1 binding units, their localization to CpG Islands, and their potential function in mitotic chromatin.” Bina M, Wyss P, et al. BMC Genomics. 14:927 (2013).

Binding Sites Bioinformatics Cell division Chemistry Chromatin structure Cis-elements Codes in DNA CpG islands Gene bookmarking Gene Regulation Mammalian genomes Mitosis MLL MLL binding sites Mouse genome Regulatory codes TREs Trithorax response elements

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