Creator
- Haiguang Wen 9
- Kun-Han Lu, 0000-0002-0355-8515 9
- Zhongming Liu, 0000-0002-8773-4204 9
- Yizhen Zhang 8
- Jiayue Cao 7
- Junxing Shi 7
- Ho-Ching Yang, 0000-0003-2670-1772 5
- Joseph V Rispoli, 0000-0003-4514-3390 5
- Thomas M Talavage, 0000-0003-4977-6398 5
- Wenbin Zhu 5
Type
Date
subject: Neuroscience subject: Biomedical Engineering
Total is 18 Results
A Multi-state Model of the CaMKII Holoenzyme using MCell 3.3
10.4231/MV0Z-8Z57
Matthew C Pharris
,
Tamara L Kinzer-Ursem
07/29/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calcium Calmodulin Computational Modeling Kinase Neuroscience Protein Signaling Rule-Based Modeling Synaptic Plasticity
Population-specific brain templates for adolescent collision-sport athletes in Purdue Neurotrauma Group longitudinal database
10.4231/XTZT-P683
Ho-Ching Yang
,
Joseph V Rispoli
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
09/12/2019
Unbiased population-specific brain templates for local adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including a T1-weighted template and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Spatial Warping Statistical Methods Trauma Workflow
Population-specific brain atlas for adolescent collision-sport athletes in Purdue Neurotrauma Group longitudinal database
10.4231/XGNK-JX08
Ho-Ching Yang
,
Joseph V Rispoli
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
11/06/2019
Unbiased population-specific brain atlas for local adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including cortical and white matter parcellations, a T1-weighted template, and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Spatial Warping Statistical Methods Trauma Workflow
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes
10.4231/6BAR-6W02
Apekshya Chhetri
,
Ho-Ching Yang
,
Joseph V Rispoli
,
Pratik Kashyap
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
08/03/2020
Population-specific brain atlases for early-to-middle adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group, including cortical and white matter parcellations, a T1-weighted template, and a DTI template.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience NIfTI Spatial Normalization Statistical Methods Trauma Workflow
Competitive Tuning of Ca2+/Calmodulin-Activated Proteins Provides a Compensatory Mechanism for AMPA Receptor Phosphorylation in Synaptic Plasticity
10.4231/R7VX0DS0
Matthew C Pharris
,
Tamara L. Kinzer-Ursem
07/30/2018
Code for the basic 4-state competitive binding model that builds on previous work by incorporating an additional competitor for calmodulin along with a number of downstream proteins. Also include is sample code for global sensitivity analysis...
T1-weighted brain atlas for adolescent collision-sport athletes in Purdue Neurotrauma Group longitudinal database
10.4231/4668-DM62
Ho-Ching Yang
,
Joseph V Rispoli
,
Thomas M Talavage
,
Wenbin Zhu
,
Yukai Zou
01/16/2019
A population-specific brain atlas based on the T1-weighted MR scans from 215 adolescent collision-sport athletes in the longitudinal database of Purdue Neurotrauma Group.
Adolescents Atlasing Biomedical Engineering Brain Informatics Morphometrics MRI Neuroscience Spatial Normalization Spatial Warping Statistical Methods Trauma Workflow
A Multi-state Model of the CaMKII Holoenzyme using MCell 3.3
10.4231/MBPK-D277
Matthew C Pharris
,
Tamara L Kinzer-Ursem
03/11/2019
This model uses a specialized rule-based syntax in MCell 3.3 to model the twelve-subunit CaMKII holoenzyme without inducing combinatorial explosion. The model allows us to explore the regulation of CaMKII activation and autophosphorylation.
Biomedical Engineering Calmodulin Computational Modeling Neuroscience Protein Signaling
Source code for Neural Encoding and Decoding with Deep Learning for Dynamic Natural Vision
10.4231/R7N58JJ3
Haiguang Wen
,
Jiayue Cao
,
Junxing Shi
,
Kun-Han Lu
,
Yizhen Zhang
,
Zhongming Liu
11/17/2017
This document includes the main source code (Matlab or Python) related to our study.
Biomedical Engineering deep learning FMR1 LIBI Matlab natural vision neural decoding Neural encoding Neuroscience Python Code Source Code
fMRI Data for Human Subjects During Musical Perception and Imagery
10.4231/R7W957B3
Gang Chen
,
Haiguang Wen
,
Kun-Han Lu
,
Yizhen Zhang
,
Zhongming Liu
01/05/2018
This fMRI dataset includes the original stimuli and the BOLD fMRI responses for a musical imagery study.
Biomedical Engineering fMRI Inter-Session Functional Connectivity Intra-Subject Reproducibility Music Imagery Neuroscience
Competitive Tuning of Ca2+/Calmodulin-Activated Proteins Provides a Compensatory Mechanism for AMPA Receptor Phosphorylation in Synaptic Plasticity
10.4231/R7ST7N11
Matthew C Pharris
,
Tamara L. Kinzer-Ursem
02/16/2018
Code for the basic 4-state competitive binding model that builds on previous work by incorporating an additional competitor for calmodulin along with a number of downstream proteins. Also include is sample code for global sensitivity analysis...
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