Datasets

subject: Biochemistry

Total is 48 Results
Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Ustilago maydis

10.4231/RZTW-V362

Alex Wang, Anusha Sriram, Ketan Jog, Leyna Duong, Mark C Hall, Michael Tian, Sabra Dunakey

08/25/2020

The Research Project in SSP Biochemistry Cdc14 enzymes have been reported to be required for normal plant infection by several plant pathogen species. In the SSP Biochemistry program, research groups of 3 participants each purify and characterize the Cd...

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Summer Science Program Ustilago maydis

Summer Science Program in Biochemistry - Characterization of the Cdc14 phosphatase homolog from Verticillium longisporum

10.4231/Q5QS-ES90

Angela Gao, Brandon L Gong, Evan A Yandell, Hyunjun Ahn, Lea E Twicken, Mark C Hall, Phuong Linh Vu

08/27/2020

The Research Project in SSP Biochemistry Cdc14 enzymes have been reported to be required for normal plant infection by several plant pathogen species. In the SSP Biochemistry program, research groups of 3 participants each purify and characterize the Cd...

antifungal design Biochemistry Cdc14 phosphatase enzyme function high school summer research Phytopathogenic fungi Plant pathogens Summer Science Program Verticillium longisporum

Characterizing a gene expression toolkit for eye- and photoreceptor-specific expression in Drosophila - Supporting data for Escobedo et al. (2021)

10.4231/6AF9-3085

Spencer Escobedo, Vikki Marie Weake

02/23/2021

The expression pattern and levels of eye- and photoreceptor-specific drivers was characterized in Drosophila melanogaster. This dataset contains the original confocal microscopy images for adult eyes (.czi), fluorescence microscopy images for embryo, larva...

Biochemistry Drosophila Eye Gal4 Photoreceptor

Regulation of Phaeodactylum plastid gene transcription

10.4231/ME5R-C919

Gilbert Kayanja, Iskander Ibrahim, Sujith Puthiyaveetil

05/19/2021

Diatoms are a diverse group of photosynthetic unicellular algae with a plastid derived from red algae. As prolific primary producers in the ocean, diatoms fix as much carbon as all rainforests combined. The molecular mechanisms that contribute to the high...

Biochemistry Gene Regulation light harvesting photosynthesis

Maize 282 Kernel Ion and Isotope BLUPs

10.4231/R7TT4P5D

Brenda F Owens, Brian Dilkes

05/31/2018

The 282 member maize association panel was grown under irrigated and non-irrigated conditions and kernels were phenotyped for ionome and isotope traits. Best linear unbiased predictions (BLUPs) of these phenotypes are presented in these files. A set of 300...

Biochemistry Carbon Drought Ionome Isotope Maize

Blue light induces a neuroprotective gene expression program in Drosophila photoreceptors - Supporting data for Hall and Ma et al. (2018)

10.4231/R77W69FM

Hana Hall, Jingqun Ma, Sudhanshu Shekhar, Vikki Weake, Walter Leon-Salas

06/20/2018

The transcriptome of blue light-stressed Drosophila melanogaster photoreceptors from one- and six-day-old adult flies was profiled using RNA-seq of photoreceptor nuclear RNA. This dataset contains the original qPCR data and summarized retinal degeneration...

Biochemistry Blue Light Differential gene expresion Drosophila Eye Gene Expression Profiling Retinal Degeneration RNA_seq Transcriptome

Proper splicing contributes to visual function in the aging Drosophila eye - Supporting data for Stegeman et al. (2018)

10.4231/R7ZG6QGD

Hana Hall, Henry Chang, Rachel Stegeman, Spencer Escobedo, Vikki Weake

06/07/2018

Splicing was analyzed in the transcriptome of aging Drosophila melanogaster photoreceptors and eyes using RNA-seq. This dataset contains the original microscopy images (tif files), summaries of qPCR, phototaxis and luciferase assay data (csv files) used to...

Aging Biochemistry Drosophila Eye Gene Expression Profiling Splicing Transcriptome Vision

The Drosophila Dbf4 ortholog Chiffon forms a complex with Gcn5 that is necessary for histone acetylation and viability - Supporting data for Torres-Zelada et al. (2018)

10.4231/R72V2DD0

Aktan Alpsoy, Benjamin D. Anderson, Eliana F. Torres-Zelada, Emily C. Dykhuizen, Laurence Florens, Michael P. Washburn, Robert E. Stephenson, Selene K. Swanson, Vikki Weake

12/11/2018

A novel histone acetyltransferase complex containing Chiffon and Gcn5 was identified in Drosophila melanogaster: Chiffon Histone Acetyltransferase (CHAT) complex. This dataset contains the mass spectrometry data (excel files), western blots (.scn and tif f...

Biochemistry Chiffon Dbf4 Drosophila Gcn5 Gene Expression Histone Acetylation Replication

Global coexpression analysis of genes in haplotype-phased genome of tetraploid blueberry.

10.4231/0FAA-GK65

Jennifer Wisecaver, Patrick Edger

02/18/2019

Text below from: Colle, M. et al. 2019. Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry. GigaScience RNAseq experiments included in this analysis include plant tissue samples (flower bud, flower at anthesis, flowe...

Biochemistry Blueberry Gene Expression Plant Metabolism RStudio

The Spliceosomal Protein SF3B5 is a Novel Component of Drosophila SAGA that Functions in Gene Expression Independent of Splicing - Supporting data for Stegeman et al. (2016)

10.4231/R74Q7S5J

Rachel Stegeman, Vikki Weake

11/03/2017

Two novel spliceosomal proteins, SF3B3 and SF3B5, were identified in the SAGA transcriptional coactivator from Drosophila melanogaster. The function of these proteins was characterized using mutations in sf3b5. This dataset contains the original microscopy...

Biochemistry Drosophila Gene Expression SAGA Splicing Transcription

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