Datasets

Subject
Creator
Type
Date

subject: Biochemistry type: dataset

Total is 46 Results
Predicted regulatory signals in the human HOXA locus: supplemental material for the report: Discovering sequences with potential regulatory characteristics

10.4231/D3DZ03214

Gregory E. Crawford , Minou Bina ORCID logo , Phillip J. Wyss , Sang P. Park , Sheryl A. Lazarus , Syed A. Shah , Wenhui Ren , Wojciech Szpankowski , Xiaohui C. Song

12/17/2013

Supplementary materials for the paper: Discovering sequences with potential regulatory characteristics. Bina M, Wyss P, Lazarus SA, Shah SR, Ren W, Szpankowski W, Crawford GE, Park SP, Song XC. Genomics. 2009 Apr;93(4):314-22

Binding-site Biochemistry Bioinformatics Codes in Human DNA DNASE-I hypersensitive sites Gene Regulation Genetic Vocabulary Human Genome Hypersensitive Sites Molecular Biosciences Promoter Regions Regulatory Signals Sequence Context Transcription factor binding sites Transcription Factors

Figure X: Insolubility of AarCH6-C357Y

10.4231/D31834278

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Figures from Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023

10.4231/D3WH2DF2W

Elwood A. Mullins , T. Joseph Kappock

10/22/2013

Supplementary to Mullins E.A. and Kappock T.J. (2013) "Functional analysis of the acetic acid resistance (aar) gene cluster in Acetobacter aceti strain 1023." Acetic Acid Bacteria 2: e3. (DOI: 10.4081/aab.2013.s1.e3).

Acidophile Biochemistry Chemistry citric acid cycle enzyme Molecular Biosciences

Pharris et al. MethodsX (2017) Supplemental Data Set

10.4231/R7M043DC

David Umulis , Matthew Pharris , Tamara Kinzer-Ursem ORCID logo , Tzu-Ching Wu , Vikki Weake ORCID logo , Xinping Chen ORCID logo , Xu Wang

04/19/2017

Supplemental data and full source code for smFISH analysis in Drosophila melanogaster adult photoreceptor neurons.

Biochemistry Drosophila Photoreceptor RNAscope smFISH

Supporting data for Ma and Weake 2014 JoVE publication

10.4231/R7TD9V91

Jingqun Ma , Vikki Marie Weake ORCID logo

02/06/2017

Supporting and raw data for Figures 1, 2, 3 and Table 1 from: Ma, J. and Weake, V.M. (2014). Affinity-based isolation of tagged nuclei from Drosophila tissues for gene expression analysis. Journal of Visualized Experiments 85. PMID:24686501.

Biochemistry cell-type specific Drosophila Gene Expression nuclei affinity purification nuclei isolation

Genetic engineering of Arabidopsis to overproduce disinapoyl esters, potential lignin modification molecules

10.4231/R77H1GJB

Clint C S Chapple ORCID logo , Huaping Mo , Jeong Kim , Shinyoung Lee

02/02/2017

BBIO-D-16-00198R1 Genetic engineering of Arabidopsis to overproduce disinapoyl esters, potential lignin modification molecules Shinyoung Lee; Huaping Mo; Jeong Im Kim; Clint Chapple. Biotechnology for Biofuels

Arabidopsis Biochemistry Biotechnology

Supporting data for Ma et al. 2016 G3 publication

10.4231/R7PG1PQR

Jingqun Ma , Pete E Pascuzzi , Vikki Marie Weake ORCID logo

02/20/2017

Supporting and raw data for Figures 1 - 5 and Figure S1 from: Ma et al. (2016) Transcriptome Profiling Identifies Multiplexin as a target of SAGA Deubiquitinase Activity in Glia.... G3 (Bethesda). PMID: 27261002.

axon guidance Biochemistry Drosophila glia Neuroscience nonstop RNA_seq SAGA sgf11 Transcriptome

Evaluation of Function Predictions for Moonlighting Proteins

10.4231/D3T727G0X

Catherine Rayon , Daisuke Kihara ORCID logo , Ishita K. Khan , Meghana Chitale

02/14/2013

Supplemental datasets used for evaluation of function predictions for moonlighting proteins.

Biochemistry Bioinformatics Molecular Biosciences proteomics

Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP

10.4231/D3Z02Z836

Daisuke Kihara ORCID logo , Meghana Chitale , Troy Hawkins

02/14/2013

Supplementary Material for the Paper: Functional similarity network with high confidence protein function prediction by PFP. BMC Bioinformatics. 2010 May 19;11:265. doi: 10.1186/1471-2105-11-265.

Biochemistry Bioinformatics Computational Biology / Methods Genetic Molecular Biosciences Proteins / Metabolism

Threading Without Optimizing Weighting Factor for the Scoring Function Proteins

10.4231/D3PK0719W

Daisuke Kihara ORCID logo , David Yifeng

02/14/2013

Supplementary Material for the Paper: Threading Without Optimizing Weighting Factor for the Scoring Function Proteins, in revision (2008). Proteins. 2008 Nov 15;73(3):581-96. doi: 10.1002/prot.22082.

Algorithms Biochemistry Bioinformatics databases Molecular Biosciences Protein Proteins / chemistry

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