Subject
Creator
- Minou Bina, 0000-0001-6833-8698 16
- Phillip J. Wyss 9
- Timothy S. Zwier, 0000-0002-4468-5748 5
- Phillip Wyss 4
- Xiaohui Carol Song 4
- Xiaohui Song 4
- Brian Fisher 3
- Felipe Rivera-Adorno 3
- Patrick S. Walsh 3
- Ryan Moffet 3
Type
- Dataset 33
Date
Total is 33 Results
Mimicking the First Turn of an Alpha-Helix with an Unnatural Backbone: Conformation-Specific IR and UV Spectroscopy of Cyclically Constrained Beta/Gamma-Peptides (Dataset)
10.4231/R7B56GN2
Brian Fisher
,
Joseph R. Gord
,
Patrick S. Walsh
,
Samuel Gellman
,
Timothy S. Zwier
10/07/2014
Contained within are the text files for all experimental spectra presented in the paper as well as the Gaussian09 output files for assigned structures.
Chemistry Conformation Specific Spectroscopy Double Resonance Spectroscopy Foldamers Peptides Secondary Structure
Potential Transcription Factor Binding Sites in the Human Genome (hg19)
10.4231/R7JM27JN
10/08/2014
Supplementary material for the article entitled “Discovering sequences with potential regulatory characteristics”. Bina M., Wyss P., et al. Genomics 93:314-22 (2009).
Binding Sites Chemistry Gene Regulation Human Genome TFBSs Transcription Transcription factor binding sites Transcription Factors
Occurrences of MLL1 morphemes in human cDNAs retrieved from GenBank
10.4231/R71834DW
04/24/2015
Supplementary material for the publication entitled “Impact of the MLL1 Morphemes on Codon Utilization and Preservation in CpG Islands.” Bina, M, Wyss P. Biopolymers in press.
Biochemistry Bioinformatics Chemistry Coding sequences Codon bias Codon selection Codon utilization CpG islands Exon Exons Genomics Human Genome MLL1 morphemes in CDSs MLL1 morphemes in exons Morphemes MLL1 Overlapping codes Regulatory codes in DNA Trithorax response elements
Mixed 14/16 Helices in the Gas Phase: Conformation-Specific Spectroscopy of Z?(Gly)n, n = 1, 3, 5 (Dataset)
10.4231/R73F4MHR
Evan Buchanan
,
Jacob Dean
,
Timothy S. Zwier
12/19/2014
Mixed 14/16 Helices in the Gas Phase: Conformation-Specific Spectroscopy of Z?(Gly)n, n = 1, 3, 5 (Dataset)
Chemistry Conformation Specific Spectroscopy Double Resonance Spectroscopy Peptides Secondary Structure
Cyclic Constraints on Conformational Flexibility in γ-Peptides: Conformation Specific IR and UV Spectroscopy - Data Set
10.4231/R7TX3C94
Brian Fisher
,
Evan Buchanan
,
Patrick S. Walsh
,
Ryoji Kusaka
,
Samuel Gellman
,
Timothy S. Zwier
,
William H James III
01/07/2015
Contained within are .txt files for all experimentally recorded spectra, and the output files for the assigned structures.
Chemistry Conformation-Specific Foldamers Gas-Phase Infrared Mass Resolved Resonant Ion-dip infrared spectroscopy resonant two-photon ionization Spectroscopy Structure Determination Ultraviolet
Role of Ring-Constrained Gamma-Amino Acid Residues in Alpha/Gamma-Peptide Folding: Single-Conformation UV and IR Spectroscopy (Dataset)
10.4231/R7Q81B0F
Brian Fisher
,
Di Zhang
,
Joseph R. Gord
,
Patrick S. Walsh
,
Ryoji Kusaka
,
Samuel Gellman
,
Timothy S. Zwier
01/07/2015
Contained within are the text files for all experimental spectra presented in the paper as well as the Gaussian09 output files for assigned structures.
Chemistry Conformation Specific Spectroscopy Double Resonance Spectroscopy Foldamers Peptides Secondary Structure
Gas-Phase Folding of a Prototypical Protonated Pentapeptide: Spectroscopic Evidence for Formation of a Charge-stabilized Beta-Hairpin (Structures)
10.4231/R7XG9P3W
Andrew F. DeBlase
,
James G. Redwine
,
John R. Hopkins
,
Nicole Lyn Burke
,
Scott A. McLuckey
,
Timothy S. Zwier
02/17/2016
Contains .log files for structures accompanying the paper titled: "Gas-Phase Folding of a Prototypical Protonated Pentapeptide: Spectroscopic Evidence for Formation of a Charge-stabilized β-Hairpin"
Beta-Hairpin Beta-turn Chemistry Ion Spectroscopy Leucine enkephalin Mass Spectrometry Spectroscopy
Positions of ZFBS and ZFBS-Morph overlaps in the build mm9 of the mouse genome
10.4231/R7C82782
Minou Bina
,
Phillip Wyss
,
Xiaohui Song
04/24/2017
Supplementary materials for the publication entitled “Imprinted Control Regions Include Composite DNA Elements consisting of the ZFP57 Binding Site overlapping MLL1 Morphemes” Bina M. Genomics, in press
Chemistry Codes in DNA CpG-rich motifs DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions KMT2A MLL binding sites MLL1 morphemes ZFP57
Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging
10.4231/R73N21C7
Aaron Cohen-Gadol
,
Alan Jarmusch
,
Clint Alfaro
,
Eyas Hattab
,
Robert Graham Cooks
,
Valentina Pirro
08/15/2016
Desorption electrospray ionization - mass spectrometry (DESI-MS) imaging was used to analyze unmodified human brain tissue sections from 39 subjects sequentially in the positive and negative ionization modes.
Brain Cancer Chemistry Imaging Mass Spectrometry Neurology Pathology
Positions of known ICRs/gDMRs with respect to peaks in plots of ZFBS-morph-overlap density in the mouse genome
10.4231/V87T-4X79
06/04/2020
Supplementary material for the publication entitled “Simultaneous discovery of candidate imprinted genes and Imprinting Control Regions in the mouse genome” Bina M., and Wyss P. bioRxiv doi: https://doi.org/10.1101/780551 (2019).
Binding Sites Chemistry DMRs Gene Regulation Genomic imprinting Germline DMRs ICRs Imprinting Control Regions Mammalian genomes MLL1 morphemes Mouse genome ZFP57
Display #
Results 1 - 10 of 33